Academic work · Ryoma Bise
Publications
Peer-reviewed papers, conference presentations, patents, and research grants.
Peer-reviewed papers
108 items202614 papers
- Preserving DEG Rankings for Gene Discovery in Histology-Based Spatial Gene Expression PredictionThe Fortieth Annual Conference on Neural Information Processing Systems (NeurIPS), 2026.
- Rethinking Microscopy Generation: Co-Designed Diffusion for Biologically Interpretable Single-Cell SynthesisBritish Machine Vision Conference (BMVC), 2026.
- Leveraging Vision-Language Models as Weak Annotators in Active LearningIEEE International Conference on Image Processing (ICIP), 2026. (Spotlight Oral; top 8% of accepted papers)
- Weakly Supervised Instance-Level Gleason Pattern Estimation Using Primary and Secondary LabelsThe Fifth Workshop on Applications of Medical AI (AMAI), MICCAI 2026 Workshop.
- Leveraging Cell-level Spatial Transcriptomics as Weak Supervision for Nuclei ClassificationInternational Workshop on Medical Imaging Analysis for Spatial Omics (MISO), MICCAI 2026 Workshop.
- Cell Instance Segmentation via Multi-Task Image-to-Image Schrödinger BridgeInternational Joint Conference on Neural Networks (IJCNN), 2026.
- Leveraging Label Proportion Prior for Class-Imbalanced Semi-Supervised LearningIEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2026.
- Quantitative assessment of fibroelastosis reveals distinct elastic and collagen fibre patterns in idiopathic and secondary pleuroparenchymal fibroelastosisVirchows Archiv (in press).
- Cell-Type Prototype-Informed Neural Network for Gene Expression Estimation from Pathology ImagesThe IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2026.
- VesselFusion: Diffusion Models for Vessel Centerline Extraction from 3D CT ImagesIEEE 23rd International Symposium on Biomedical Imaging (ISBI), 2026.
- Bridging the Density Gap: Diffusion Model for Stepwise Generation of Dense Cell Images from Sparse DataIEEE 23rd International Symposium on Biomedical Imaging (ISBI), 2026. (Best Paper Runners-Up Award)
- Hypernetwork-Based Adaptive Aggregation for Multimodal Multiple-Instance Learning in Predicting Coronary Calcium DebulkingIEEE 23rd International Symposium on Biomedical Imaging (ISBI), 2026.
- Ranking-Guided Semi-Supervised Domain Adaptation for Severity ClassificationIEEE 23rd International Symposium on Biomedical Imaging (ISBI), 2026.
- Auxiliary Gene Learning: Spatial Gene Expression Estimation by Auxiliary Gene SelectionThe 40th Annual AAAI Conference on Artificial Intelligence (AAAI), 2026.
202514 papers
- Single-cell synaptome mapping of endogenous protein subpopulations in mammalian brain
Nature Comunications, 16, 9705, 2025.
- Learning to Relative Expression under Batch Effects and Stochastic Noise in Spatial TranscriptomicsThe Thirty-Ninth Annual Conference on Neural Information Processing Systems (NeurIPS), 2025.
- Learning from Majority Label: A Novel Problem in Multi-class Multiple-Instance LearningPattern Recognition, 112425, 2025.
- Development and evaluation of deep learning models for detecting and classifying various bone tumours in full-field limb radiographs using automated object detection modelsBone & Joint Research, 14(9), 760, 2025.
- NoiseCutMix: A Novel Data Augmentation Approach by Mixing Estimated Noise in Diffusion Models.International Conference on Computer Vision Workshop LIMIT (ICCVW), 2025.
- Vascular Photoacoustic Volume Registration via 2D Feature Matching with Reverse Mapping Based on Maximum Intensity ProjectionInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2025.
- Domain Adaptation for Ulcerative Colitis Severity Estimation Using Patient-Level DiagnosesWorkshop on MICCAI: MLMI, 2025.
- Domain Generalization of Pathological Image Segmentation by Patch-Level and WSI-Level Contrastive LearningInternational Conference on Machine Vision Applications (MVA), 2025
- Enhancing Reliability of Medical Image Diagnosis through Top-rank Learning with Rejection ModuleInternational Conference on Machine Vision Applications (MVA), 2025
- Weakly-Supervised Domain Adaptation with Proportion-Constrained Pseudo-LabelingInternational Joint Conference on Neural Networks (IJCNN), 2025
- Medical Image Alignment for Different Resolutions and Fields of View Using Contrastive Learning with Feature-Level SimilarityInternational Conference of the IEEE Engineering in Medicine and Biology Society (EMBC),2025
- Instance-wise Supervision-level Optimization in Active LearningIEEE CVPR, 2025. (Top Conference in Computer Vision, acceptance rate:22.1%)
- Towards Spatial Transcriptomics-Guided Pathological Image Recognition With Batch-Agnostic EncoderIEEE International Symposium on Biomedical Imaging (ISBI), 2025.
- Ordinal Multiple-instance Learning for Ulcerative Colitis Severity Estimation with Selective Aggregated TransformerIEEE/CVF Winter Conference on Applications of Computer Vision (WACV), 2025. (accepted, acceptance rate in Round 1:12% (167/1381) )
202415 papers
- Label-free live cell recognition and tracking for biological discoveries and translational applicationsnpj Imaging, 2, 41, 2024.
- Guidance-base Diffusion Models for Improving Photoacoustic Image QualityThe British Machine Vision Conference (BMVC), 2024. (accepted, acceptance rate:25.8% (264/1020) )
- Theoretical Proportion Label Perturbation for Learning from Label Proportions in Large BagsEuropean Conference on Artificial Intelligence (ECAI), 2024. (acceptted, acceptance rate:23% (547/2344) )
- Adaptive Pseudo Label Selection for Individual Unlabeled Data by Positive and Unlabeled LearningMICCAI Workshop (ADSMI), 2024. (acceptted)
- Deep Bayesian Active Learning-to-Rank with Relative Annotation for Estimation of Ulcerative Colitis SeverityMedical Image Analysis, 2024. (accepted, IF:10.7)
- Learning from Partial Label Proportions for Whole Slide Image SegmentationInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI),2024. (Early Accept, acceptance rate:11%)
- Diameter-based pseudo labeling for pathological image segmentationInternational Conference of the IEEE Engineering in Medicine and Biology Society (EMBC),2024
- Domain Generalization for Pathological Images Using the Storage Period InformationIEEE International Symposium on Biomedical Imaging (ISBI), 2024.
- A Deep Learning?Based Assay for Programmed Death Ligand 1 Immunohistochemistry Scoring in Non?Small Cell Lung Carcinoma: Does it Help Pathologists Score?Modern Pathology. 37, 6, 100485, 2024. (IF:8.209)
- A data augmentation approach that ensures the reliability of foregrounds in medical image segmentationImage and Vision Computing, 147, 105056, 2024. (IF:4.2)
- Development of an automatic surgical planning system for high tibial osteotomy using artificial intelligenceKnee. 48, pp.128-137, 2024. (IF:1.9)
- Precise immunofluorescence canceling for highly multiplexed imaging to capture specific cell statesNature communications. 15, 1, 3657, 2024. (IF:17.7)
- Counting Network for Learning from Majority LabelIEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP),2024,(Top Conference in Signal Processing)
- Viable tumor cell density after neoadjuvant chemotherapy assessed using deep learning model reflects the prognosis of osteosarcomanpj Precision Oncology, 2024 (Top Journal on Oncology, IF:10.123)
- Deep Learning for Predicting Effect of Neoadjuvant Therapies in Non?small Cell Lung Carcinomas With Histologic ImagesModern Pathology, 2024 (Top Journal on Pathology, IF:8.209)
202313 papers
- Analysis of optical absorption of photoaged human skin using a high-frequency illumination microscopy analysis systemExperimental Dermatology, 32, 9, pp.1402-1411, 2023. (IF:3.6)
- Artificial intelligence quantifying endoscopic severity of ulcerative colitis in gradation scaleDigestive Endoscopy, 32, 9, pp.1402-1411, 2023 (IF:6.337)
- MixBag: Bag-Level Data Augmentation for Learning from Label ProportionsInternational Conference on Computer Vision (ICCV),2023,(top conference in computer vision)
- Proportion Estimation by Masked Learning from Label ProportionWorkshop on MICCAI: DALI, pp.117-126, 2023.
- Mitosis Detection from Partial Annotation by Dataset Generation via Frame-Order FlippingInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2023),
2023,(top conference in medial image analysis)
- Cell Tracking in C. elegans with Cell Position Heatmap-Based Alignment and Pairwise DetectionInternational Conference of the IEEE Engineering in Medicine and Biology Society (EMBC),2023
- Learning From Label Proportion with Online Pseudo-Label Decision by Regret MinimizationIEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP2023),2023
(top conference in signal processing)
- Spatial Distribution-based Pseudo Labeling for Pathological Image SegmentationIEEE International Symposium on Biomedical Imaging (ISBI), 2023.
- Cluster Entropy: Active Domain Adaptation in Pathological Image SegmentationIEEE International Symposium on Biomedical Imaging (ISBI), 2023. (Oral)
- Cluster-Guided Semi-Supervised Domain Adaptation for Imbalanced Medical Image ClassificationIEEE International Symposium on Biomedical Imaging (ISBI), 2023.
- Mixing Data Augmentation with Preserving Foreground Regions in Medical Image SegmentationIEEE International Symposium on Biomedical Imaging (ISBI), 2023. (Oral)
- Multi-Frame Attention with Feature-Level Warping for Drone Crowd TrackingWinter Conference on Applications of Computer Vision 2023 (WACV2023),2023. (accepted)
- Weakly Supervised Cell-Instance Segmentation with Two Types of Weak Labels by Single Instance PastingWinter Conference on Applications of Computer Vision 2023 (WACV2023),2023. (accepted)
20225 papers
- Deep learning-based automatic-bone-destruction-evaluation system using contextual information from other jointsArthritis Research & Therapy, 2022. (IF:5.606)
- Unsupervised Deep Robust Non-Rigid Alignment by Low-Rank Loss and Multi-Input AttentionInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2022),
2022,(top conference in medial image analysis)
- Multi-Class Cell Detection Using Modified Self-AttentionCVPR Workshop, Computer Vision for Microscopy Image Analysis (CVMI), 2022
- Effective pseudo-labeling based on heatmap for unsupervised domain adaptation in cell detectionMedical Image Analysis, vol.79, 102436, https://doi.org/10.1016/j.media.2022.102436, 2022
(top journal in medicalImage analysis, IF:13.828)
- Consistent Cell Tracking in Multi-Frames With Spatio-Temporal Context by Object-Level Warping LossIEEE/CVF Winter Conference on Applications of Computer Vision, pp.1727-1736, 2022
20218 papers
- Weakly Supervised Cell Instance Segmentation Under Various ConditionsMedical Image Analysis, vol.73, 102182, https://doi.org/10.1016/j.media.2021.102182, 2021, October
(top journal in medicalImage analysis, IF:11.148)
- Patch-Based Cervical Cancer Segmentation using Distance from Boundary of TissueInternational Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), 2021
- Unsupervised Body Hair Detection by Positive-Unlabeled Learning in Photoacoustic ImageInternational Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), 2021
- Semi-supervised Cell Detection in Time-lapse Images Using Temporal ConsistencyInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2021),
2021, (accepted, top conference in medial image analysis)
- Cell Detection from Imperfect Annotation by Pseudo Label Selection Using P-classificationInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2021),
2021, (accepted, top conference in medial image analysis)
- Order-Guided Disentangled Representation Learning for Ulcerative Colitis Classification with Limited LabelsInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2021),
2021, (accepted, top conference in medial image analysis)
- Cell Detection in Domain Shift Problem Using Pseudo-Cell-Position HeatmapInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2021),
2021, (accepted, top conference in medial image analysis, Provisional acceptance rate:13%)
- Soft and Self Constrained Clustering for Group-Based LabelingMedical Image Analysis, https://doi.org/10.1016/j.media.2021.102097, 2021, May
(in press, top journal in medicalImage analysis, IF:11.148)
20206 papers
- Light‐sheet microscopy‐based 3D single‐cell tracking reveals a correlation between cell cycle and the start of endoderm cell internalization in early zebrafish developmentDevelopment, Growth and Differentiation, vol.62(7), pp.495--502, https://doi.org/10.1111/dgd.12695, 2020, November, (IF:1.723)
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation16th European Conference on Computer Vision (ECCV2020)
2020, (accepted, Top Conference in Computer Vision, acceptance rate:27%)
- Negative Pseudo Labeling using Class Proportion for Semantic Segmentation in Pathology16th European Conference on Computer Vision (ECCV2020)
2020, (accepted, Top Conference in Computer Vision, acceptance rate:27%)
- Imaging Scattering Characteristics of Tissue in Transmitted MicroscopyInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2020),
2020, (accepted, top conference in medial image analysis)
- Spatial-Temporal Mitosis Detection in Phase-Contrast Microscopy Via Likelihood Map Estimation by 3DCNNProceedings of 42st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2020.
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- MPM: Joint Representation of Motion and Position Map for Cell TrackingIEEE CVPR, 2020. (oral, Top Conference in Computer Vision, acceptance rate:22%)
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201910 papers
- Efficient Soft-Constrained Clustering for Group-Based LabelingInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2019),
2019, (top conference in medial image analysis, acceptance rate:31%)
- Weakly Supervised Cell Segmentation in Dense by Propagating from Detection MapInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2019),
2019, (top conference in medial image analysis, early acceptance rate:16%)
- Cell Tracking with Deep Learning for Cell Detection and Motion Estimation in Low-Frame-RateInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2019),
2019,(top conference in medial image analysis, early acceptance rate:16%)
- Endoscopic Image Clustering with Temporal Ordering Information Based on Dynamic ProgrammingProceedings of 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2019.
- Scribbles for Metric LearningProceedings of 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2019.
- Adaptive Weighting Multi-Field-of-View CNN for Semantic Segmentation in PathologyIEEE CVPR, 2019. (Top Conference in Computer Vision, Poster, acceptance rate:25%)
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- SEMI-SUPERVISED LEARNING WITH STRUCTURED KNOWLEDGE FOR BODY HAIR DETECTION IN PHOTOACOUSTIC IMAGEIEEE International Symposium on Biomedical Imaging (ISBI), 2019. (Oral)
- Estimation of Wetness and Color From A Single Multispectral ImageIEEE transactions on pattern analysis and machine intelligence, 10.1109/TPAMI.2019.2903496, 2019. (IF:9.455)
- Digital artery deformation on movement of the proximal interphalangeal jointJournal of Hand Surgery(European Volume), doi:1753193418807833, 2019. (IF:2.648)
- Phase Contrast Time-Lapse Microscopy Datasets with Automated and Manual Cell Tracking AnnotationsScientific Data, doi: 10.1038/sdata.2018.237, 2019. (IF:5.305)
20181 papers
- Light-sheet microscopy reveals site-specific 3-dimensional patterns of the cutaneous vasculature and pronounced rarefication in aged skinJournal of Dermatological Science, 92(1), pp.3-5, 2018. (IF: 3.675)
20174 papers
- Virtual Blood Vessels in Complex Background using Stereo X-ray ImagesICCV Workshop, BioImage Computing, 2017
- Semi-Supervised Learning for Biomedical Image Segmentation via Forest Oriented Super Pixels(Voxels)International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI),
pp.702-710, 2017,(top conference in medial image analysis, acceptance rate:33%)
- Separation of Transmitted Light and Scattering Components in Transmitted MicroscopyInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2016),
pp.702-710, 2017,(top conference in medial image analysis, acceptance rate:33%)
- Wetness and Color from a Single Multispectral ImageIEEE Conference on Computer Vision and Pattern Recognition(CVPR),
pp.3967-3975, 2017,(top conference in computer vision,oral, acceptance rate: 2.5%).
20163 papers
- Vascular registration in Photoacoustic imaging by low-rank alignment via forground, background, and complement decompositionInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI2016),
pp.362-334,2016, (top conference in medial image analysis, early acceptance < 11%)
- 3D structure modeling of dense capillaries by multi-objects trackingProceedings of IEEE CVPR2016 Workshop: Computer Vision for Microscopy Analysis(CVMIA)
pp.265-270, July. 2016
- Tracing behavior of endothelial cells promotes vascular network formationMicrovascular Research 105, pp.125-131, 2016. (Impact Factor(IF):2.300)
20151 papers
- Cell Detection Method from Redundant Candidates under the Non-Overlapping ConstraintsIEEE Trans. on Medical Imaging, 34(7), pp.1417-1427, 2015. (IF:3.799)
20132 papers
- Cell Tracking Under High Confluency Conditions by Candidate Cell Region Detection Based Association ApproachProceedings of BioMed 2013(oral)
- An improvement of the design method of cellular neural networks based on generalized eigenvalue minimizationIEEE Trans. Circuits and Systems I: Fundamental Theory and Applications, 50(12), 1569-1574, 2013 (IF:2.303)
20122 papers
- Mechanical characterization of adult stem cells from bone marrow and perivascular nichesJournal of biomechanics, 45(7), pp.1280-1287, 2012. (IF:2.496)
- BTracking of hematopoietic stem cells in microscopy images for lineage determinationIEEE Trans. Biomedical engineering, (accepted,IF:2.233)
20116 papers
- Automated Mitosis Detection of Stem Cell Populations in Phase-Contrast Microscopy ImagesIEEE Trans. Med. Imaging, 30(3),pp.586-596, 2011 (IF:3.799)
- An engineered approach to stem cell culture: automating the decision process for real-time adaptive subculture of stem cellsPloS one 6 (11), e27672. (IF:3.534)
- Automatic Cell Tracking Applied to Analysis of Cell Migration in Wound Healing Assay Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp.6174-6179, 2011(oral)
- Reliable Cell Tracking by Global Data Association Proceedings of IEEE International Symposium on Biomedical Imaging (ISBI)pp.1004-1010, 2011.(oral,acceptance rate < 18%)
- Mitosis Detection for Stem Cell Tracking in Phase-Contrast Microscopy Images Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI)pages 2121-2127, 2011
- Cell Image Analysis: Algorithms, System and Applications Proceedings of IEEE Winter Conference on Applications of Computer Vision (WACV)pp.374-381, 2011
20102 papers
- Detection of Hematopoietic Stem Cells in Microscopy Images Using a Bank of Ring Filters Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI)pp.137-140, 2010
- Cell Segmentation in Microscopy Imagery Using a Bag of Local Bayesian Classifiers Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI)pp.125-128, 2010
20091 papers
- Reliably Tracking Partially Overlapping Neural Stem Cells in DIC Microscopy Image Sequences Proceedings of MICCAI Workshop on OPTMHisEpp.67-77, 2009
20021 papers
- On the design method of cellular neural networks for associative memories based on generalized eigenvalue problem Proceedings of IEEE Cellular Neural Networks and Their Applicationspp.515-522, 2002
International presentations (not peer reviewed)
21 items20201 papers
- Dan Wang, Xu Zhang, Kazuya Nishimura, Rocky Tuan, Ryoma Bise, Dai Fei Elmer Ker
Label-Free Cell Detection in Phase Contrast Images Using Artificial Neural Networks
Orthopaedic Research Society (ORS) Annual Meeting, 2020.3.
20197 papers
- Junya Hayashida, Ryoma Bise
Cell Tracking by estimating cell motions for high-throughput screening
In Resonance Bio International Symposium, Japan, November 2019. - Nishimura Kazuya, Dai Fei Elmer Ker, Ryoma Bise
Deep learning for cell segmentation with less annotation
In Resonance Bio International Symposium, Japan, November 2019. - Kentaro Abe, Hideaki Hayashi, Ryoma Bise, Takuji Kawamura, Naokuni Sakiyama, Kiyohito Tanaka, Seiichi Uchida
Clustering of Colonoscopic Image with Multi-Task Learning
The 15th Joint Workshop on Machine Perception and Robotics (MPR2019), Shiga, Japan, 2019.11. - Ryo Kikkawa, Ryoma Bise
Weakly Supervised Body Hair Detection in Photoacoustic Image
The 15th Joint Workshop on Machine Perception and Robotics (MPR2019), Shiga, Japan, 2019.11. - Nishimura Kazuya, Dai Fei Elmer Ker, Ryoma Bise
Weakly supervised Cell Segmentation
The 15th Joint Workshop on Machine Perception and Robotics (MPR2019), Shiga, Japan, 2019.11. - Junya Hayashida, Ryoma Bise
Cell Tracking with CNN for Cell Detection and Association
The 15th Joint Workshop on Machine Perception and Robotics (MPR2019), Shiga, Japan, 2019.11. - Yuki Teramoto, Akihiko Yoshizawa, Ryoma Bise, Hiroki Tokunaga, Naoki Nakajima, and Hironori Haga
Deep learning for cell segmentation with less annotation
United States & Canadian Academy of Pathology Annual Meeting (USCAP 2019), March 2019 (Poster presentation,査読有り)
20181 papers
- Matsumoto Y, Gu L, Bise R, Asao Y, Sekiguchi H, Yoshikawa A, Ishii T, Takada M, Kataoka M, Sakurai T, Yagi T, Sato I, Togashi K, Shiina T, and Toi M.
Machine learning-based structural analysis and oxygen saturation measurement of tumor-associated vessels in breast cancer using a photoacoustic tomography system
USA, San Antonio Breast Cancer Symposium 2018.
20162 papers
- K.Kajiya, R.Bise, C.Seidel, I. Sato, T. Yamashita, and M. Detmar
Cleaning of a human skin and its application for the three-dimensional visualization of the vasculature
Journal of Investigative Dermatology, 136, 9, S254, 2016. - A. Kondow, K. Ohnuma, S. Nonaka, Y. Kamei, R. Bise, Y. Sato, T. Kobayashi, and K. Hashimoto
In vivo measurement of the Nodal signal followed by 3D tracking during early zebrafish development
JSDB Special Symposium: Frontier of Developmental Biology, June 2016.
20141 papers
- R. Bise et al.
3D Cell Tracking Under Dense Cell Culture Conditions by Preserving the Structure of Neighbor Cells
IEEE International Symposium on Biomedical Imaging(ISBI) 2014
20113 papers
- R. Bise and T. Akai
Cell Migration Assay Kit based on Smart Surface and Cell Tracking
First Workshop on Computer Vision Tracking of Cell Populations 2011 (oral) - R. Bise, Z. Yin, S. Huh, S. Eom, and T. Kanade
Global Tree Structure Association Method for Tracking Cells and Creating Lineage Tree
First Workshop on Computer Vision Tracking of Cell Populations 2011 (Poster) - E.D.F. Ker, L. Weiss, S. Junkers, M. Chen, Z. Yin, E. Highley, S. Huh, M.F. Sandbothe, S. Eom, R. Bise, T. Kanade, and P. Campbell
Towards Robotic Subculture of Cells: Automating the Decision Process for Real Time Adaptive Subculture of Stem Cells
First Workshop on Computer Vision Tracking of Cell Populations 2011 (Poster)
20104 papers
- R. Bise et al.
Cell Image Analysis Technology Applications
Bioimage Informatics 2010 - R. Bise et al.
Real-time System for Microscope Imaging, Cell Tracking, and Adaptive Culturing
Bioimage Informatics 2010 (Poster) - T. Kanade, M.F. Sandbothe, D.F.E. Ker, S. Eom, R. Bise, S.Huh, Z. Yin, and M. Chen
Real-time System for Microscope Imaging, Cell Tracking, and Adaptive Culturing
Bioimage informatics, 2010, (Poster) - T. Kanade, S. Eom, R. Bise, Seung-il Huh, Zhaozheng Yin, and Mei Chen
Cell Image Analysis Technology Applications
Bioimage informatics, 2010, (Poster)
20092 papers
- R. Bise, Kang Li, and Takeo Kanade
Cell Tracking with Occlusion Handling
ntel Labs Pittsburgh Open House 2009 - R. Bise, K. Li, and T. Kanade
Automated Stem Cell Tracking through Long-Term Partial Overlap
Annual meeting of Biomedical Engineering Society(BMES), 2009
Domestic conferences and symposia
74 itemsTitles are shown as presented. Links for MIRU 2025–2026 point to author publication records.
202612 items
- Gleason Scoreを活用した弱教師あり学習による病理画像のセグメンテーションPRMU 2026 · PRMU2025-35
- 拡散モデルによる3次元CT画像からの血管中心線推定PRMU 2026 · PRMU2025-36
- Schrödinger Bridgeによる細胞セグメンテーションPRMU 2026 · PRMU2025-37
- ラベル比率からの学習のための比率エントロピーに基づくカリキュラム学習MIRU 2026
- 能動学習における弱教師としての視覚言語モデルの活用MIRU 2026 · IS3-069
- 距離加重サンプリングに基づく医療検査項目の逐次選択MIRU 2026
- PrimaryおよびSecondaryラベルを用いた弱教師あり病理画像セグメンテーションMIRU 2026
- Optimal Transport based Anatomical Labeling of Coronary CenterlinesJoint Conference of Electrical, Electronics and Information Engineers in Kyushu 2026 · 07-1P-01
- ハイパーネットワークを用いたドメイン適応Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2026 · 09-2A-02
- 視覚基盤モデルと視覚言語モデルの共同によるゼロショット画像分類の性能改善Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2026 · 09-2A-03
- 複数タスク学習を用いた拡散モデルによる網膜血管セグメンテーションJoint Conference of Electrical, Electronics and Information Engineers in Kyushu 2026 · 09-2P-03
- 双曲埋め込みを用いた順序分類のための表現学習Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2026 · 09-2P-05
202517 items
- 空間トランスクリプトームを用いた病理画像認識PRMU 2025 · PRMU2024-34
- 拡散モデルによる画像とクラスの共起学習PRMU 2025 · PRMU2024-42
- 空間トランスクリプトミクスにおけるバッチ効果と確率的ノイズ下での相対発現学習MIRU 2025
- Spatial Transcriptomics Estimation via Informative Gene SelectionMIRU 2025
- 冠動脈CT画像を用いた石灰化切削必要性推定のためのMultimodal ModelMIRU 2025
- Leveraging Patient-Level Diagnosis for Domain Adaptation in Ulcerative Colitis Severity AssessmentMIRU 2025
- 拡散モデルにおける推定ノイズのCutMixによるデータ拡張MIRU 2025
- 病理スライド画像からの遺伝子発現推定のための細胞種毎のプロトタイプを組み込んだNeural NetworkMIRU 2025
- 拡散モデルを用いた細胞検出MIRU 2025
- 条件付き拡散モデルの不確実性分析MIRU 2025
- 拡散モデルによる画像とクラスの共起生成MIRU 2025
- 比率に基づく弱教師あり学習による病理組織認識Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2025 · 04-2A-01
- 医療検査項目の適応的選択法Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2025 · 04-2A-07
- 生成モデルによるCT画像からの血管抽出Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2025 · 04-2P-03
- 拡散モデルに基づく画像とクラスラベルの同時生成Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2025 · 04-2P-04
- 順序クラス分類におけるデータ拡張Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2025 · 04-2P-07
- 冠動脈インターベンションにおける心臓CT画像を用いたAIの活用Japanese Association of Cardiovascular Intervention and Therapeutics 2025 · 2025年7月
202414 items
- 最重症度ラベルを用いたマルチインスタンス学習PRMU 2024 · PRMU2023-61
- 巨大バッグに対するLearning from Label Proportionのための理論的ラベル比率摂動MIRU 2024 · OS-1A-02
- Semi-supervised Domain Adaptation Using Class Order for Severity ClassificationMIRU 2024 · OS-1B-06
- 重症度比較における不確実性と信頼度に基づく教師なしドメイン適応MIRU 2024 · OS-1D-03
- 潰瘍性大腸炎の重症度推定を目的とした選択的集約トランスフォーマーによる順序ありクラスのマルチインスタンス学習MIRU 2024 · IS-1-053
- 撮像条件情報を用いたガイダンスを導入した拡散モデルによる光超音波画像の画質改善MIRU 2024 · OS-2D-04
- 異なるスケール間での画像位置合わせ手法の検討MIRU 2024 · IS-2-178
- Prototypeに基づいたAttentionによるLearning from Label ProportionsMIRU 2024 · OS-3A-06
- 多数派クラスラベルからの学習を目的とした数え上げネットワークMIRU 2024 · IS-3-046
- テキスト情報を用いた病理画像分類Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2024 · 10-2A-03
- 拡散モデルを利用した分布外検出Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2024 · 10-2P-06
- Multi Instance Learningとドメイン適応を用いた医療画像診断Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2024 · 10-2P-10
- 冠動脈CTを用いた冠動脈疾患の手術支援Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2024 · 10-2P-11
- Development of a deep learning model to discriminate uterine cervical intraepithelial neoplasia biopsies using whole slide imagingsJapanese Society of Pathology 2024 · 2024年3月
202318 items
- 部分的なアノテーションを用いた細胞分裂検出PRMU 2023 · PRMU2022-67
- 部分的なラベル比率からの学習PRMU 2023 · PRMU2022-92
- 年代情報を用いた病理画像のためのドメイン一般化PRMU 2023 · PRMU2023-16
- 医用画像セグメンテーションにおけるPU Learningを用いた疑似ラベル選択PRMU 2023 · PRMU2023-17
- WSIに対する部分的なラベル比率からの学習MIRU 2023 · OS1B-L2
- Learning from Label Proportionによる陽性腫瘍の比率推定MIRU 2023 · OS2B-S6
- 時間順序反転を用いたデータセット作成による部分的なアノテーションによる細胞分裂検出MIRU 2023 · OS2B-S7
- クラス比率学習におけるバッグ単位のデータ拡張MIRU 2023 · OS6B-L1
- クラスの順序関係を利用した半教師付きドメイン適応MIRU 2023 · IS3-36
- 医用画像セグメンテーションにおけるPU Learningを用いた疑似ラベル選択MIRU 2023 · IS3-94
- 病理画像セグメンテーションにおける腫瘍の長径を用いた弱教師付き半教師学習の提案MIRU 2023 · IS3-95
- 深層学習を用いた光超音波画像の画質改善Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2023 · 05-2A-04
- 異なるスケールの画像間の位置合わせ手法の検討Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2023 · 05-2A-08
- 対照学習を用いた細胞形状に頑健な細胞検出Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2023 · 05-2P-07
- 信頼区間を考慮したLLP手法による巨大バッグからの学習Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2023 · 05-2P-08
- Development of Single-Cell, Spatiotemporal, Quantitative Imaging Method for Endogenous Proteins in Mammalian BrainsJapanese Association of Anatomists 2023 · 第128回
- WSI特徴を用いたドメイン一般化IEICE Medical Imaging (MI) 2023 · 2023年3月
- 光超音波画像における反射ノイズの推定IEICE Medical Imaging (MI) 2023 · 2023年3月
202213 items
- 病理画像における腫瘍領域の空間分布に基づく半教師学習PRMU 2022 · PRMU2022-8
- 特徴量ワーピングを導入した時間情報集約によるマルチオブジェクトトラッキングPRMU 2022 · PRMU2022-33
- 部分的な教師データを用いた細胞検出PRMU 2022 · PRMU2022-55
- オンライン予測理論に基づく擬似ラベル手法によるクラス比率からの学習PRMU 2022 · PRMU2022-57
- 病理画像セグメンテーションにおける腫瘍領域の空間分布に基づく疑似ラベル選択法の提案MIRU 2022 · OL3B-1
- Self-Attentionによる大局的時間情報を考慮した複数物体トラッキングMIRU 2022 · OS2A-6
- Deep Non-Rigid Registration for Noisy-and-Corrupted ImagesMIRU 2022 · OS3A-7
- 複数種の弱教師を用いたsingle instance pastingによる細胞画像セグメンテーションMIRU 2022 · OS3A-8
- Semi-Supervised Domain Adaptation for Class-Imbalanced DatasetMIRU 2022 · OS3A-9
- 線虫の時系列3D神経細胞データに対する神経細胞追跡Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2022 · 04-1A-01
- 病理画像における腫瘍及び正常細胞検出Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2022 · 04-1A-02
- 病理画像セグメンテーションのための半教師ドメイン適応Joint Conference of Electrical, Electronics and Information Engineers in Kyushu 2022 · 04-1A-03
- バイオメディカル画像解析に関する Label Efficient LearningBioimaging Society of Japan 2022 · 第31回・シンポジウム1
Invited talks, seminars and tutorials
11 items20254 items
- 医工連携における画像情報学研究 ~不完全な教師データを用いた機械学習~Symposium on Sensing via Image Information SSII2025, 2025 · Tutorial
- ラベル効率的な学習によるバイオ医療画像認識Cancer Research Institute Seminar(2025年4月), 2025 · Seminar
- バイオ医療画像のための少数データに対する機械学習手法Quantitative Biology Meeting, Kyushu Caravan2025(1月11日), 2025 · Tutorial
- 計測インフォマティクス・データ解析81st Annual Meeting of the Japanese Society of Microscopy・IMB-7, 2025 · Invited talk
20243 items
- バイオ医療画像認識におけるLabel Efficient LearningVision Engineering Workshop ViEW2024, 2024 · Keynote talk
- 教師データの不足を補う:少数データに対する機械学習手法概要43rd Annual Meeting of the Japanese Society of Medical Imaging Technology JAMIT2024, 2024 · Tutorial
- 基礎生物学研究所セミナー(12月27日)National Institute for Basic Biology, 2024 · Seminar
20233 items
- 第69回日本病理学会秋期特別総会Japanese Society of Pathology, 2023 · Invited talk
- 建設土木AIシンポジウムCivil Engineering AI Symposium, 2023 · Talk
- 新潟大学セミナーNiigata University, 2023 · Seminar
20221 items
- バイオメディカル画像解析に関する Label Efficient Learning31st Annual Meeting of the Bioimaging Society of Japan, Symposium 1, 2022 · Symposium talk
PhD thesis
1 items- Ryoma Bise
Cell Tracking Under Dense Cell Culture Conditions for Cell Behavior Analysis
Graduate School of Interdisciplinary Information Studies, The University of Tokyo, 2015.05